What to Do When You Receive an HMRC Investigation Letter

Published by Farazia Gillani posted in HMRC notices, HMRC Tax Investigations on 7 January 2025

If you receive an HMRC investigation letter, first establish what HMRC is checking, note the response deadline and gather the relevant records. Do not ignore the letter or send a rushed explanation based on incomplete information.

A clear, evidence-based response starts with understanding the request. An HMRC letter does not automatically mean you have committed an offence or owe extra tax.

It may concern a particular figure, a return or a wider compliance check. What matters is the wording of your letter, the tax and period involved, and whether it includes a formal notice.

Have a letter in front of you? Note its reference, deadline and requested documents before preparing your reply.

This guide explains your immediate steps, which records to prepare, what to avoid and when specialist representation can help.

Your first steps after an HMRC letter

HMRC investigations in UK involve reviewing tax records to check for errors, underpayments, or suspected fraud cases.
1. Verify the letter
2. Record the deadline
3. Identify the scope
4. Organise records
5. Prepare the response

1. Check that the contact is genuine

If the letter is unexpected, check it against HMRC’s guidance on genuine letters. If you remain unsure, verify the contact through an independently obtained GOV.UK contact route before sending financial information. Do not rely only on a telephone number or link in suspicious correspondence.

2. Record the deadline and reference

Keep a copy of the letter and attachments, and add the deadline to your calendar. There is no single response period for every HMRC investigation letter: use the deadline stated in your correspondence. If you cannot provide everything in time, contact the officer promptly, explain what is missing and ask whether more time can be agreed. Do not assume an extension has been granted.

3. Identify exactly what HMRC wants

List the tax, accounting period, figures and documents mentioned. Distinguish between an initial request and a formal information notice. An information notice is a legal requirement, and the notice explains any available appeal rights. If you disagree with a request, seek advice on the proper response rather than ignoring it.

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Organise your evidence and plan the response

An accountant is analysing financials to find out common triggers for HMRC tax investigations.

4. Organise the evidence before explaining the figures

Preserve the original records and collect the material relevant to the request. Build a simple index linking each question to its supporting documents. Where a figure does not reconcile, identify the difference before presenting an explanation. Separate confirmed facts from matters that still need checking.

5. Decide whether specialist support is needed

Your regular accountant may already hold the records and be able to help. Specialist support is particularly useful when the enquiry covers several taxes or years, material discrepancies, disputed penalties or allegations of deliberate conduct. Agree who will coordinate correspondence so HMRC receives a consistent response.

If you need help interpreting the letter, Apex Accountants’ HMRC tax investigation service can help you assess the request and plan your response.

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Which records should you prepare?

Investigation from HMRC illustrated by a magnifying glass inspecting a compliance document with a verified check mark.

The letter should guide your document collection. This checklist is a starting point, not a requirement to send every record you hold.

Area mentioned Examples to gather Preparation task
HMRC correspondence The opening letter, notices, attachments and previous replies Create a dated correspondence log with references and deadlines.
Company accounts and Corporation Tax Accounts, tax returns, computations, ledgers and supporting invoices Trace the questioned figure from the return to its underlying records.
VAT VAT returns, sales and purchase invoices, reconciliations and relevant contracts Identify the transactions and periods mentioned in the request.
PAYE and employee benefits Payroll reports, submissions, expense records and benefits documentation Match the requested information to the relevant employees and dates.
Personal, property or overseas income Returns, income statements, bank records and relevant ownership or transaction documents Keep an evidence trail for how each amount was reported.

If records are unavailable, explain the gap to your adviser and explore legitimate ways to obtain copies. Do not fabricate documents or alter originals. For wider company record-keeping guidance, see records a limited company should keep.

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What should you avoid?

Businessman working at desk with clock in focus, symbolising urgency around HMRC investigation time limits.
  • Missing a deadline: respond or raise difficulties before the due date.
  • Guessing: do not turn an estimate or assumption into a statement of fact.
  • Sending an unchecked document bundle: organise the material so each document has a clear purpose.
  • Assuming every letter alleges fraud: read the actual scope and wording.
  • Assuming every request is informal: formal notices can carry obligations and consequences.
  • Using a generic disclosure route without checking it: the right procedure depends on the issue and circumstances.

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What happens during an HMRC investigation?

Magnifying glass on financial records symbolising checks during tax investigations from HMRC for compliance and accuracy.

HMRC may ask questions, request further documents or arrange a meeting or visit. You can have an accountant or legal adviser with you during a visit. The process may develop as evidence is reviewed, so keep a record of requests, replies and agreed actions.

At the end of a check, HMRC tells you the result. Depending on the findings, there may be no additional liability, a repayment, or additional tax, interest and potentially penalties. Do not assume a particular outcome simply because an investigation has begun. HMRC’s compliance-check guidance explains the process.

For more detail, see our guides to common investigation triggers and investigation duration and time limits.

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Could you face a penalty?

HMRC Personal Tax Investigation shown with a suited professional inspecting documents closely. reflecting financial scrutiny.

A penalty is not an automatic consequence of receiving a letter. If an inaccuracy is found, the applicable rules depend on the tax, circumstances and behaviour involved. HMRC distinguishes between errors despite reasonable care, careless inaccuracies and deliberate behaviour.

For inaccuracies covered by HMRC’s CC/FS7A guidance, disclosure and assistance can affect the penalty calculation. A disclosure made after HMRC has contacted you may be treated differently from an unprompted disclosure. Your adviser should assess the actual rules rather than apply one percentage to every case. See HMRC’s penalties factsheet.

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When the letter mentions Code of Practice 9

A magnifying glass highlights Penalties from HMRC Tax Investigations for late filing or inaccurate tax returns.

A Code of Practice 9 (COP9) letter needs specialist attention. Under COP9, HMRC suspects a loss of tax through deliberate behaviour and may offer the Contractual Disclosure Facility (CDF). This is different from an ordinary request to clarify a return.

HMRC provides a 60-day period from receipt of the CDF offer to respond. The choice and disclosure requirements have significant consequences. Obtain specialist advice promptly rather than using a standard response letter. Read HMRC’s COP9 guidance.

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How can an adviser help?

Business professional reviewing governance and compliance frameworks while evaluating effective Tax Planning Strategies.

An adviser can interpret the letter, organise supporting evidence, check reconciliations and handle correspondence within the agreed engagement. HMRC requires appropriate authorisation to deal with an adviser on your behalf; its current compliance-check guidance refers to form COMP1a. Appointing an adviser does not remove your responsibility for your tax affairs. See HMRC’s agent-authorisation guidance.

Rana’s background includes a period working within HMRC followed by many years advising individuals and businesses on enquiries and investigations. His experience covers VAT, PAYE, Corporation Tax, Personal Tax, property, Capital Gains Tax, overseas income and overseas assets.

Apex Accountants can help you understand the correspondence, prepare your position and manage the enquiry. For VAT-specific concerns, see our HMRC VAT investigation and dispute support.

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Frequently asked questions

Accountant reviewing records and financial data to provide accurate HMRC Investigation Support for businesses.

Does an HMRC investigation letter mean I have done something wrong?

No. A letter may ask you to clarify information or allow HMRC to check a return. Read the scope before drawing conclusions.

How quickly should I respond?

Work to the deadline in your letter. If you need more time, raise this promptly and confirm whether an extension is agreed. Different notices can have different rules.

Can my accountant reply for me?

Yes, where the necessary authorisation and engagement are in place. Make sure your accountant has the complete letter and supporting records.

What if I find a mistake in my return?

Preserve the evidence, establish what happened and discuss the appropriate correction or disclosure with your adviser. The procedure depends on the tax, timing and circumstances.

Can I challenge HMRC’s decision?

There may be appeal or review rights. Many tax decisions have a 30-day deadline, but use the instructions in the decision letter and obtain advice on your case. GOV.UK explains tax appeals and reviews.

Will professional help guarantee no penalty?

No. Advice can help you present accurate evidence and address issues, but the outcome depends on the facts and applicable rules.

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Received an HMRC investigation letter?

Start with the letter, its deadline and the relevant records. Book a consultation with Apex Accountants to discuss what HMRC is asking and the support you need.

General guidance checked against the linked HMRC sources on 6 October 2026. The wording and deadlines in your own correspondence should guide your response.

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