How to Avoid Common Errors in VAT for Auto Repair Shops

Published by Sidra posted in Auto Repair Shops, Value Added Tax (VAT) on August 19, 2025

Auto repair shops in the UK often handle parts sales and labour charges for the same job. While this is routine for garages, it’s also an area where errors in VAT for auto repair shops frequently occur. Incorrect VAT treatment can lead to HMRC assessments, penalties, and interest charges. At Apex Accountants, we work with garages across the country to help avoid these costly errors by getting the details right from the start.

Key Steps to Prevent Errors in VAT for Auto Repair Shops on Labour and Parts

Getting VAT right is not just about knowing the standard rate—it’s about applying the correct treatment for every line item on an invoice. The following steps can help garages avoid the most common errors.

1. Know When Labour and Parts Have Different VAT Treatment

For most repair jobs, labour and parts are subject to a standard 20% VAT rate. However, certain exceptions apply. For example, fitting zero-rated parts (such as those for qualified disability vehicle adaptations) requires zero-rated VAT on both the parts and the associated labour. Applying 20% VAT across the board in such cases would be incorrect and could result in refund claims from customers or HMRC penalties. Understanding how VAT on car repair labour applies in these situations is key to remaining compliant.

2. Avoid Incorrect VAT Splitting on MOT Repairs

A common mistake occurs when garages book an MOT (standard rate) alongside repair work. For example, a Midlands garage recently charged 20% VAT on the MOT and also applied 20% for repair labour that should have been invoiced separately. This led to an overcharge of £48 on a combined bill because the repair work should have been billed at its correct rate, not bundled with the MOT fee. They resolved the issue by reviewing invoices in Garage Hive, correcting VAT codes from “SR” (Standard Rate) on the MOT line to “MOT” (exempt code in Garage Hive), and ensuring repairs remained on “SR” separately. This example shows why following proper VAT rules for MOT and repairs is vital to prevent overcharging.

3. Keep Detailed Invoices and Clear Descriptions

HMRC looks for accurate and detailed records. Vague invoice lines such as “parts” or “repairs” can cause issues. Each part should be itemised, with the correct VAT rate displayed. Labour should be listed separately from parts, even if charged together on the same invoice. This is especially important when using QuickBooks or Xero, where VAT codes like “20% S” (standard) and “Zero Rated” must be applied correctly. Being precise with your invoice descriptions helps ensure the right VAT is applied to car repair labour every time.

4. Watch Out for Mixed-Rate Supplies

If a repair job involves both standard-rated and zero-rated parts, the invoice must show the VAT rate for each item clearly. A common error is applying the higher rate to the whole invoice or averaging the VAT across all items, both of which are incorrect.

5. Use Accounting Software Correctly

Modern garage management and cloud accounting software can automate VAT calculations, but only if set up properly. Using the wrong VAT code can lead to recurring errors. A quarterly review of codes—whether in Garage Hive, QuickBooks, or Xero—can prevent costly misclassifications and keep you compliant with VAT rules for MOT and repairs.

6. Train Staff on VAT Rules

Front-desk staff, mechanics issuing job sheets, and anyone preparing invoices should understand the basic VAT rules for your garage. Staff training reduces the risk of accidental misclassification.

Protecting Your Garage from VAT Pitfalls

With the maximum MOT price in the UK around £54.85, applying the wrong VAT treatment might seem minor, but errors across multiple jobs quickly add up. By applying the correct VAT rates, using the right codes in software, and keeping clear records, garages can stay compliant and avoid HMRC disputes. Apex Accountants provides tailored VAT support for auto repair businesses, helping you protect your profits and maintain a strong compliance record.

Contact us today to arrange a VAT review or compliance check for your garage.

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